Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Carlr-201ENSMUST00000181515 2574 ntBASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gm12008-201ENSMUST00000117791 755 ntBASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Mir5122-201ENSMUST00000175004 89 ntBASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gm2274-201ENSMUST00000184539 609 ntBASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav3-3Q5R1C3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-3Q5R1C3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm22240-201ENSMUST00000175225 82 ntBASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Gm18041-201ENSMUST00000218210 618 ntBASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-3Q5R1C3 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms