Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col27a1Q5QNQ9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Gm43822-201ENSMUST00000200285 476 ntBASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Gm18905-201ENSMUST00000205454 928 ntBASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Gm45930-201ENSMUST00000221330 292 ntBASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col27a1Q5QNQ9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm27516-201ENSMUST00000184237 98 ntBASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm4857-201ENSMUST00000192718 785 ntBASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm38341-201ENSMUST00000195357 515 ntBASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm37466-201ENSMUST00000195692 652 ntBASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Col27a1Q5QNQ9 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Gm29649-201ENSMUST00000185649 419 ntBASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms