Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Gm43433-201ENSMUST00000196573 481 ntBASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ddx49Q4FZF3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Gm24694-201ENSMUST00000180054 110 ntBASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Gm27663-201ENSMUST00000184839 110 ntBASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ddx49Q4FZF3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx49Q4FZF3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ddx49Q4FZF3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx49Q4FZF3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx49Q4FZF3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx49Q4FZF3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx49Q4FZF3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx49Q4FZF3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx49Q4FZF3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms