Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.32■□□□□ 0.36
Prpf38aQ4FK66 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Prpf38aQ4FK66 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Gm14057-201ENSMUST00000120631 482 ntBASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf38aQ4FK66 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Gm8749-201ENSMUST00000117737 331 ntBASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Gm18766-201ENSMUST00000189811 808 ntBASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.29■□□□□ 0.36
Prpf38aQ4FK66 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Prpf38aQ4FK66 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms