Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim40Q3UWA4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Trim40Q3UWA4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trim40Q3UWA4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim40Q3UWA4 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim40Q3UWA4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim40Q3UWA4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trim40Q3UWA4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Grk6-207ENSMUST00000225925 2769 ntBASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Gm19164-201ENSMUST00000210667 640 ntBASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trim40Q3UWA4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Gm10231-201ENSMUST00000181584 441 ntBASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Gm10175-202ENSMUST00000208752 441 ntBASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim40Q3UWA4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Trim40Q3UWA4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms