Protein–RNA interactions for Protein: Q3UW77

Gm12888, MCG59630, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12888Q3UW77 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Gm9013-201ENSMUST00000132939 882 ntBASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.05□□□□□ -0.64
Gm12888Q3UW77 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Gm12888Q3UW77 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Gm12888Q3UW77 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Carlr-201ENSMUST00000181515 2574 ntBASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Gm12888Q3UW77 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms