Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.33□□□□□ -0.44
Znf48Q3US17 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.33□□□□□ -0.44
Znf48Q3US17 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.33□□□□□ -0.44
Znf48Q3US17 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.33□□□□□ -0.44
Znf48Q3US17 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.32□□□□□ -0.44
Znf48Q3US17 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.32□□□□□ -0.44
Znf48Q3US17 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Znf48Q3US17 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.32□□□□□ -0.44
Znf48Q3US17 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Znf48Q3US17 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.32□□□□□ -0.44
Znf48Q3US17 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Gm25406-201ENSMUST00000157599 105 ntBASIC12.32□□□□□ -0.44
Znf48Q3US17 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.32□□□□□ -0.44
Znf48Q3US17 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.32□□□□□ -0.44
Znf48Q3US17 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.32□□□□□ -0.44
Znf48Q3US17 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.32□□□□□ -0.44
Znf48Q3US17 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Znf48Q3US17 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.32□□□□□ -0.44
Znf48Q3US17 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 App-207ENSMUST00000227737 2827 ntBASIC12.31□□□□□ -0.44
Znf48Q3US17 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.31□□□□□ -0.44
Znf48Q3US17 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Znf48Q3US17 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.31□□□□□ -0.44
Znf48Q3US17 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Gm8396-201ENSMUST00000057361 823 ntBASIC12.31□□□□□ -0.44
Znf48Q3US17 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.31□□□□□ -0.44
Znf48Q3US17 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Znf48Q3US17 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Znf48Q3US17 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Znf48Q3US17 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.3□□□□□ -0.44
Znf48Q3US17 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Znf48Q3US17 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Znf48Q3US17 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Znf48Q3US17 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Znf48Q3US17 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Znf48Q3US17 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms