Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Gm2451-201ENSMUST00000199447 999 ntBASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Gm10290-201ENSMUST00000200451 999 ntBASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Gm11025-201ENSMUST00000140773 466 ntBASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Gm45612-201ENSMUST00000211320 160 ntBASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.63□□□□□ -0.23
Nhlrc4Q3UP44 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nhlrc4Q3UP44 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms