Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gm44450-201ENSMUST00000199528 114 ntBASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cks1brtQ3UNC9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1brtQ3UNC9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Cks1brtQ3UNC9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1brtQ3UNC9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1brtQ3UNC9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1brtQ3UNC9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cks1brtQ3UNC9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Gm6257-201ENSMUST00000163864 910 ntBASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cks1brtQ3UNC9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cks1brtQ3UNC9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms