Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Naf1Q3UMQ8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Gm2810-201ENSMUST00000118681 990 ntBASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Naf1Q3UMQ8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Gm7774-201ENSMUST00000200064 533 ntBASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Naf1Q3UMQ8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Naf1Q3UMQ8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Naf1Q3UMQ8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Naf1Q3UMQ8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Naf1Q3UMQ8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Naf1Q3UMQ8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 AA543401-201ENSMUST00000164248 1269 ntBASIC15.08■□□□□ 0
Naf1Q3UMQ8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Gm10253-201ENSMUST00000194270 940 ntBASIC15.08■□□□□ 0
Naf1Q3UMQ8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.08■□□□□ 0
Naf1Q3UMQ8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Naf1Q3UMQ8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Naf1Q3UMQ8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms