Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm22323-201ENSMUST00000103832 109 ntBASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Spg11Q3UHA3 BC001981-202ENSMUST00000191393 1545 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Gm6334-201ENSMUST00000207083 228 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Gm16505-201ENSMUST00000179981 232 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Gm8598-201ENSMUST00000221184 836 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Gm3222-201ENSMUST00000071282 990 ntBASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Spg11Q3UHA3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Spg11Q3UHA3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms