Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Brf2Q3UAW9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14□□□□□ -0.17
Brf2Q3UAW9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14□□□□□ -0.17
Brf2Q3UAW9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Brf2Q3UAW9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14□□□□□ -0.17
Brf2Q3UAW9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Brf2Q3UAW9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14□□□□□ -0.17
Brf2Q3UAW9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Brf2Q3UAW9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Brf2Q3UAW9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Brf2Q3UAW9 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brf2Q3UAW9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Brf2Q3UAW9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Brf2Q3UAW9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Brf2Q3UAW9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Brf2Q3UAW9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Brf2Q3UAW9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Gm27628-201ENSMUST00000184911 107 ntBASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Gm2651-201ENSMUST00000203560 838 ntBASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Brf2Q3UAW9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms