Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Gm9727-201ENSMUST00000161387 555 ntBASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctdnep1Q3TP92 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctdnep1Q3TP92 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Gm2451-201ENSMUST00000199447 999 ntBASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Gm10290-201ENSMUST00000200451 999 ntBASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Ctdnep1Q3TP92 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctdnep1Q3TP92 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms