Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hddc2Q3SXD3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hddc2Q3SXD3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.83□□□□□ -0.2
Hddc2Q3SXD3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Gm2274-201ENSMUST00000184539 609 ntBASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hddc2Q3SXD3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.81□□□□□ -0.2
Hddc2Q3SXD3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Gm7370-201ENSMUST00000219471 767 ntBASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hddc2Q3SXD3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms