Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Olfr284-202ENSMUST00000206647 966 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm18212-201ENSMUST00000211678 889 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Gm10752-201ENSMUST00000218348 729 ntBASIC13.18□□□□□ -0.3
Chd8Q09XV5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd8Q09XV5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.17□□□□□ -0.3
Chd8Q09XV5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.17□□□□□ -0.3
Chd8Q09XV5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Gm29396-201ENSMUST00000185659 716 ntBASIC13.17□□□□□ -0.3
Chd8Q09XV5 Gm6621-201ENSMUST00000193251 772 ntBASIC13.17□□□□□ -0.3
Chd8Q09XV5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.17□□□□□ -0.3
Chd8Q09XV5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.17□□□□□ -0.3
Chd8Q09XV5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.17□□□□□ -0.3
Chd8Q09XV5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd8Q09XV5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chd8Q09XV5 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Chd8Q09XV5 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.16□□□□□ -0.3
Chd8Q09XV5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.16□□□□□ -0.3
Chd8Q09XV5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd8Q09XV5 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm22331-201ENSMUST00000158066 136 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm5051-201ENSMUST00000204085 485 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm45118-201ENSMUST00000208928 825 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms