Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Tff1Q08423 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Gm8097-201ENSMUST00000117903 829 ntBASIC12.35□□□□□ -0.43
Tff1Q08423 Gm15173-201ENSMUST00000122049 433 ntBASIC12.35□□□□□ -0.43
Tff1Q08423 Gm12497-201ENSMUST00000138778 237 ntBASIC12.35□□□□□ -0.43
Tff1Q08423 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.35□□□□□ -0.43
Tff1Q08423 Gm7063-201ENSMUST00000186840 981 ntBASIC12.35□□□□□ -0.43
Tff1Q08423 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Gm2756-201ENSMUST00000195851 400 ntBASIC12.35□□□□□ -0.43
Tff1Q08423 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.35□□□□□ -0.43
Tff1Q08423 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tff1Q08423 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tff1Q08423 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tff1Q08423 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.35□□□□□ -0.43
Tff1Q08423 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tff1Q08423 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tff1Q08423 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.35□□□□□ -0.43
Tff1Q08423 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.34□□□□□ -0.43
Tff1Q08423 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.34□□□□□ -0.43
Tff1Q08423 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Tff1Q08423 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.34□□□□□ -0.43
Tff1Q08423 Gm14722-201ENSMUST00000118943 689 ntBASIC12.34□□□□□ -0.43
Tff1Q08423 Gm8344-201ENSMUST00000119813 856 ntBASIC12.34□□□□□ -0.43
Tff1Q08423 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.34□□□□□ -0.43
Tff1Q08423 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Tff1Q08423 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Tff1Q08423 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.34□□□□□ -0.43
Tff1Q08423 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.34□□□□□ -0.43
Tff1Q08423 Psmb5-202ENSMUST00000227257 622 ntBASIC12.34□□□□□ -0.43
Tff1Q08423 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tff1Q08423 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tff1Q08423 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tff1Q08423 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tff1Q08423 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tff1Q08423 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Tff1Q08423 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Tff1Q08423 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tff1Q08423 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Tff1Q08423 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Tff1Q08423 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tff1Q08423 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tff1Q08423 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Tff1Q08423 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms