Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hspg2Q05793 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Hspg2Q05793 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.77□□□□□ -0.68
Hspg2Q05793 Gm13216-201ENSMUST00000117145 591 ntBASIC10.77□□□□□ -0.69
Hspg2Q05793 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Hspg2Q05793 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hspg2Q05793 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Carlr-201ENSMUST00000181515 2574 ntBASIC10.77□□□□□ -0.69
Hspg2Q05793 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Hspg2Q05793 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.69
Hspg2Q05793 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hspg2Q05793 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm12341-201ENSMUST00000119724 503 ntBASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm5479-201ENSMUST00000160578 435 ntBASIC10.76□□□□□ -0.69
Hspg2Q05793 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm7561-201ENSMUST00000211203 886 ntBASIC10.76□□□□□ -0.69
Hspg2Q05793 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.76□□□□□ -0.69
Hspg2Q05793 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hspg2Q05793 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm5187-201ENSMUST00000117317 991 ntBASIC10.76□□□□□ -0.69
Hspg2Q05793 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.76□□□□□ -0.69
Hspg2Q05793 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hspg2Q05793 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Hspg2Q05793 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Gm15808-201ENSMUST00000119046 604 ntBASIC10.75□□□□□ -0.69
Hspg2Q05793 Gm16570-201ENSMUST00000161951 436 ntBASIC10.75□□□□□ -0.69
Hspg2Q05793 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Hspg2Q05793 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hspg2Q05793 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hspg2Q05793 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
Hspg2Q05793 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.75□□□□□ -0.69
Hspg2Q05793 Mir8109-201ENSMUST00000184375 117 ntBASIC10.75□□□□□ -0.69
Hspg2Q05793 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.75□□□□□ -0.69
Hspg2Q05793 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 AC133083.1-201ENSMUST00000221736 2209 ntBASIC10.75□□□□□ -0.69
Hspg2Q05793 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.75□□□□□ -0.69
Hspg2Q05793 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
Hspg2Q05793 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.75□□□□□ -0.69
Hspg2Q05793 AA619741-201ENSMUST00000195095 646 ntBASIC10.75□□□□□ -0.69
Hspg2Q05793 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.75□□□□□ -0.69
Hspg2Q05793 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Hspg2Q05793 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Hspg2Q05793 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Gm19220-201ENSMUST00000222682 803 ntBASIC10.74□□□□□ -0.69
Hspg2Q05793 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Hspg2Q05793 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Hspg2Q05793 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms