Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Col6a2Q02788 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.82□□□□□ -0.04
Col6a2Q02788 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.82□□□□□ -0.04
Col6a2Q02788 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.82□□□□□ -0.04
Col6a2Q02788 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a2Q02788 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.82□□□□□ -0.04
Col6a2Q02788 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Col6a2Q02788 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.81□□□□□ -0.04
Col6a2Q02788 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Gm13616-201ENSMUST00000120600 222 ntBASIC14.81□□□□□ -0.04
Col6a2Q02788 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.81□□□□□ -0.04
Col6a2Q02788 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 BC037039-201ENSMUST00000192003 2205 ntBASIC14.81□□□□□ -0.04
Col6a2Q02788 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Col6a2Q02788 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a2Q02788 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Gm25948-201ENSMUST00000175334 112 ntBASIC14.8□□□□□ -0.04
Col6a2Q02788 Gm42790-201ENSMUST00000201268 969 ntBASIC14.8□□□□□ -0.04
Col6a2Q02788 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.8□□□□□ -0.04
Col6a2Q02788 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a2Q02788 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Col6a2Q02788 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Mir6956-201ENSMUST00000183598 62 ntBASIC14.79□□□□□ -0.04
Col6a2Q02788 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Gm7774-201ENSMUST00000200064 533 ntBASIC14.79□□□□□ -0.04
Col6a2Q02788 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.79□□□□□ -0.04
Col6a2Q02788 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms