Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.61□□□□□ -0.23
Scn1bP97952 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn1bP97952 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.61□□□□□ -0.23
Scn1bP97952 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn1bP97952 Mir6404-201ENSMUST00000183699 94 ntBASIC13.61□□□□□ -0.23
Scn1bP97952 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.61□□□□□ -0.23
Scn1bP97952 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Scn1bP97952 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.61□□□□□ -0.23
Scn1bP97952 Gm9987-201ENSMUST00000069768 567 ntBASIC13.61□□□□□ -0.23
Scn1bP97952 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Scn1bP97952 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.61□□□□□ -0.23
Scn1bP97952 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.61□□□□□ -0.23
Scn1bP97952 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Carlr-201ENSMUST00000181515 2574 ntBASIC13.61□□□□□ -0.23
Scn1bP97952 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scn1bP97952 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Scn1bP97952 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn1bP97952 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn1bP97952 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.6□□□□□ -0.23
Scn1bP97952 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.6□□□□□ -0.23
Scn1bP97952 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn1bP97952 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn1bP97952 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.6□□□□□ -0.23
Scn1bP97952 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.6□□□□□ -0.23
Scn1bP97952 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn1bP97952 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Scn1bP97952 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Scn1bP97952 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Scn1bP97952 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn1bP97952 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn1bP97952 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn1bP97952 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scn1bP97952 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.59□□□□□ -0.23
Scn1bP97952 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn1bP97952 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scn1bP97952 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn1bP97952 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Scn1bP97952 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scn1bP97952 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn1bP97952 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn1bP97952 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms