Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smn1P97801 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Smn1P97801 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Gm12008-201ENSMUST00000117791 755 ntBASIC12.75□□□□□ -0.37
Smn1P97801 AA414768-201ENSMUST00000121924 1257 ntBASIC12.75□□□□□ -0.37
Smn1P97801 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.75□□□□□ -0.37
Smn1P97801 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.75□□□□□ -0.37
Smn1P97801 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Smn1P97801 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.75□□□□□ -0.37
Smn1P97801 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smn1P97801 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Smn1P97801 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smn1P97801 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.75□□□□□ -0.37
Smn1P97801 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smn1P97801 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smn1P97801 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.74□□□□□ -0.37
Smn1P97801 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Smn1P97801 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smn1P97801 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.74□□□□□ -0.37
Smn1P97801 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smn1P97801 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.74□□□□□ -0.37
Smn1P97801 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.74□□□□□ -0.37
Smn1P97801 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Smn1P97801 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.74□□□□□ -0.37
Smn1P97801 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smn1P97801 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Smn1P97801 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smn1P97801 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smn1P97801 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Smn1P97801 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smn1P97801 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms