Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lig3P97386 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.23■□□□□ 0.19
Lig3P97386 Gm25948-201ENSMUST00000175334 112 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm4518-201ENSMUST00000182638 718 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.23■□□□□ 0.19
Lig3P97386 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Mir6404-201ENSMUST00000183699 94 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lig3P97386 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lig3P97386 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Lig3P97386 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.23■□□□□ 0.19
Lig3P97386 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Lig3P97386 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.23■□□□□ 0.19
Lig3P97386 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.23■□□□□ 0.19
Lig3P97386 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Gm15427-201ENSMUST00000117288 531 ntBASIC16.22■□□□□ 0.19
Lig3P97386 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.22■□□□□ 0.19
Lig3P97386 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.22■□□□□ 0.19
Lig3P97386 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.22■□□□□ 0.19
Lig3P97386 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Lig3P97386 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Gm23547-201ENSMUST00000158210 271 ntBASIC16.22■□□□□ 0.19
Lig3P97386 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Gm7787-201ENSMUST00000216858 688 ntBASIC16.22■□□□□ 0.19
Lig3P97386 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.22■□□□□ 0.19
Lig3P97386 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.22■□□□□ 0.19
Lig3P97386 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lig3P97386 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Lig3P97386 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Lig3P97386 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Gm13597-201ENSMUST00000121239 375 ntBASIC16.21■□□□□ 0.19
Lig3P97386 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.21■□□□□ 0.19
Lig3P97386 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lig3P97386 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.21■□□□□ 0.19
Lig3P97386 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.21■□□□□ 0.19
Lig3P97386 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Lig3P97386 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Lig3P97386 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lig3P97386 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Lig3P97386 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.21■□□□□ 0.18
Lig3P97386 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Lig3P97386 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lig3P97386 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lig3P97386 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.2■□□□□ 0.18
Lig3P97386 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lig3P97386 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Lig3P97386 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.2■□□□□ 0.18
Lig3P97386 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.2■□□□□ 0.18
Lig3P97386 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms