Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Nkx2-3P97334 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Gm3436-201ENSMUST00000179930 840 ntBASIC18.57■□□□□ 0.56
Nkx2-3P97334 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Mir125a-201ENSMUST00000083545 68 ntBASIC18.57■□□□□ 0.56
Nkx2-3P97334 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.57■□□□□ 0.56
Nkx2-3P97334 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nkx2-3P97334 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nkx2-3P97334 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nkx2-3P97334 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.55■□□□□ 0.56
Nkx2-3P97334 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nkx2-3P97334 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nkx2-3P97334 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.54■□□□□ 0.56
Nkx2-3P97334 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Gm9229-201ENSMUST00000222777 126 ntBASIC18.54■□□□□ 0.56
Nkx2-3P97334 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nkx2-3P97334 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.54■□□□□ 0.56
Nkx2-3P97334 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nkx2-3P97334 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms