Protein–RNA interactions for Protein: P70338

Gfi1, Zinc finger protein Gfi-1, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1P70338 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1P70338 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1P70338 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1P70338 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1P70338 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1P70338 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Gfi1P70338 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gfi1P70338 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.1□□□□□ -0.15
Gfi1P70338 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1P70338 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gfi1P70338 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gfi1P70338 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.09□□□□□ -0.15
Gfi1P70338 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.09□□□□□ -0.15
Gfi1P70338 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.09□□□□□ -0.15
Gfi1P70338 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Gm16198-201ENSMUST00000118766 670 ntBASIC14.09□□□□□ -0.15
Gfi1P70338 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.09□□□□□ -0.15
Gfi1P70338 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.09□□□□□ -0.15
Gfi1P70338 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gfi1P70338 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gfi1P70338 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.09□□□□□ -0.15
Gfi1P70338 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gfi1P70338 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gfi1P70338 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gfi1P70338 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gfi1P70338 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gfi1P70338 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gfi1P70338 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Gfi1P70338 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.08□□□□□ -0.16
Gfi1P70338 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.08□□□□□ -0.16
Gfi1P70338 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.08□□□□□ -0.16
Gfi1P70338 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Gm14140-201ENSMUST00000119999 995 ntBASIC14.08□□□□□ -0.16
Gfi1P70338 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.08□□□□□ -0.16
Gfi1P70338 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Gfi1P70338 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Gfi1P70338 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gfi1P70338 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Gfi1P70338 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gfi1P70338 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.08□□□□□ -0.16
Gfi1P70338 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.08□□□□□ -0.16
Gfi1P70338 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gfi1P70338 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gfi1P70338 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gfi1P70338 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gfi1P70338 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.07□□□□□ -0.16
Gfi1P70338 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.07□□□□□ -0.16
Gfi1P70338 Gm5177-201ENSMUST00000183092 997 ntBASIC14.07□□□□□ -0.16
Gfi1P70338 Gm17968-201ENSMUST00000194902 784 ntBASIC14.07□□□□□ -0.16
Gfi1P70338 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.07□□□□□ -0.16
Gfi1P70338 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.07□□□□□ -0.16
Gfi1P70338 Psmb5-202ENSMUST00000227257 622 ntBASIC14.07□□□□□ -0.16
Gfi1P70338 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfi1P70338 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms