Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pdlim4P70271 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.37□□□□□ -0.43
Pdlim4P70271 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 Gm9727-201ENSMUST00000161387 555 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.37□□□□□ -0.43
Pdlim4P70271 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pdlim4P70271 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pdlim4P70271 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pdlim4P70271 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.36□□□□□ -0.43
Pdlim4P70271 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pdlim4P70271 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.36□□□□□ -0.43
Pdlim4P70271 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.36□□□□□ -0.43
Pdlim4P70271 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim4P70271 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.36□□□□□ -0.43
Pdlim4P70271 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.35□□□□□ -0.43
Pdlim4P70271 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.35□□□□□ -0.43
Pdlim4P70271 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim4P70271 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim4P70271 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms