Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lhx1P63006 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lhx1P63006 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lhx1P63006 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Lhx1P63006 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lhx1P63006 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lhx1P63006 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lhx1P63006 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lhx1P63006 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lhx1P63006 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lhx1P63006 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Lhx1P63006 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Lhx1P63006 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Lhx1P63006 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.58□□□□□ -0.08
Lhx1P63006 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Lhx1P63006 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Gm13464-201ENSMUST00000119418 935 ntBASIC14.58□□□□□ -0.08
Lhx1P63006 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.58□□□□□ -0.08
Lhx1P63006 Gm24158-201ENSMUST00000175263 71 ntBASIC14.58□□□□□ -0.08
Lhx1P63006 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.58□□□□□ -0.08
Lhx1P63006 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.58□□□□□ -0.08
Lhx1P63006 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lhx1P63006 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Lhx1P63006 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Lhx1P63006 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Lhx1P63006 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.57□□□□□ -0.08
Lhx1P63006 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lhx1P63006 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lhx1P63006 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Lhx1P63006 Gm15920-201ENSMUST00000118998 402 ntBASIC14.57□□□□□ -0.08
Lhx1P63006 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.57□□□□□ -0.08
Lhx1P63006 Gm10253-201ENSMUST00000194270 940 ntBASIC14.57□□□□□ -0.08
Lhx1P63006 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.57□□□□□ -0.08
Lhx1P63006 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.57□□□□□ -0.08
Lhx1P63006 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.57□□□□□ -0.08
Lhx1P63006 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.57□□□□□ -0.08
Lhx1P63006 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.57□□□□□ -0.08
Lhx1P63006 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Lhx1P63006 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Lhx1P63006 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Lhx1P63006 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Lhx1P63006 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Lhx1P63006 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.56□□□□□ -0.08
Lhx1P63006 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Lhx1P63006 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Lhx1P63006 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Lhx1P63006 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.56□□□□□ -0.08
Lhx1P63006 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms