Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.19■□□□□ 0.02
Ybx1P62960 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.19■□□□□ 0.02
Ybx1P62960 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ybx1P62960 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.19■□□□□ 0.02
Ybx1P62960 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.19■□□□□ 0.02
Ybx1P62960 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.19■□□□□ 0.02
Ybx1P62960 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ybx1P62960 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.18■□□□□ 0.02
Ybx1P62960 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.18■□□□□ 0.02
Ybx1P62960 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Gm13823-201ENSMUST00000119930 345 ntBASIC15.18■□□□□ 0.02
Ybx1P62960 Gm14719-201ENSMUST00000121891 340 ntBASIC15.18■□□□□ 0.02
Ybx1P62960 Gm16215-201ENSMUST00000161990 637 ntBASIC15.18■□□□□ 0.02
Ybx1P62960 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ybx1P62960 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.18■□□□□ 0.02
Ybx1P62960 Gm7730-201ENSMUST00000212486 454 ntBASIC15.18■□□□□ 0.02
Ybx1P62960 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.18■□□□□ 0.02
Ybx1P62960 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ybx1P62960 Celf4-206ENSMUST00000224553 1729 ntBASIC15.17■□□□□ 0.02
Ybx1P62960 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.17■□□□□ 0.02
Ybx1P62960 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.17■□□□□ 0.02
Ybx1P62960 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.17■□□□□ 0.02
Ybx1P62960 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ybx1P62960 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Gm14767-201ENSMUST00000121559 586 ntBASIC15.17■□□□□ 0.02
Ybx1P62960 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Ybx1P62960 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Gm43767-201ENSMUST00000198933 381 ntBASIC15.17■□□□□ 0.02
Ybx1P62960 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Gm44855-201ENSMUST00000205725 362 ntBASIC15.17■□□□□ 0.02
Ybx1P62960 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ybx1P62960 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ybx1P62960 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.17■□□□□ 0.02
Ybx1P62960 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ybx1P62960 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.16■□□□□ 0.02
Ybx1P62960 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.16■□□□□ 0.02
Ybx1P62960 Gm44344-201ENSMUST00000200287 129 ntBASIC15.16■□□□□ 0.02
Ybx1P62960 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.16■□□□□ 0.02
Ybx1P62960 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ybx1P62960 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ybx1P62960 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms