Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lsm5P62322 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lsm5P62322 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm5P62322 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm5P62322 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Lsm5P62322 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Lsm5P62322 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm5P62322 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Lsm5P62322 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Lsm5P62322 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Lsm5P62322 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.39□□□□□ -0.43
Lsm5P62322 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Lsm5P62322 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Lsm5P62322 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lsm5P62322 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm5P62322 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Gm27389-201ENSMUST00000183622 195 ntBASIC12.39□□□□□ -0.43
Lsm5P62322 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.39□□□□□ -0.43
Lsm5P62322 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.39□□□□□ -0.43
Lsm5P62322 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.39□□□□□ -0.43
Lsm5P62322 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Lsm5P62322 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Lsm5P62322 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lsm5P62322 Grk6-207ENSMUST00000225925 2769 ntBASIC12.39□□□□□ -0.43
Lsm5P62322 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Lsm5P62322 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.38□□□□□ -0.43
Lsm5P62322 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.38□□□□□ -0.43
Lsm5P62322 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.38□□□□□ -0.43
Lsm5P62322 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Lsm5P62322 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.38□□□□□ -0.43
Lsm5P62322 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.38□□□□□ -0.43
Lsm5P62322 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lsm5P62322 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lsm5P62322 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm5P62322 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.37□□□□□ -0.43
Lsm5P62322 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm5P62322 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Lsm5P62322 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm5P62322 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lsm5P62322 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.37□□□□□ -0.43
Lsm5P62322 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.37□□□□□ -0.43
Lsm5P62322 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lsm5P62322 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms