Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ythdf1P59326 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ythdf1P59326 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ythdf1P59326 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ythdf1P59326 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ythdf1P59326 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ythdf1P59326 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.29□□□□□ -0.12
Ythdf1P59326 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Gm43767-201ENSMUST00000198933 381 ntBASIC14.29□□□□□ -0.12
Ythdf1P59326 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ythdf1P59326 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Ythdf1P59326 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.29□□□□□ -0.12
Ythdf1P59326 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ythdf1P59326 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ythdf1P59326 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ythdf1P59326 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ythdf1P59326 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.28□□□□□ -0.12
Ythdf1P59326 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Gm27011-201ENSMUST00000182352 972 ntBASIC14.28□□□□□ -0.12
Ythdf1P59326 Gm8318-201ENSMUST00000182954 872 ntBASIC14.28□□□□□ -0.12
Ythdf1P59326 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.28□□□□□ -0.12
Ythdf1P59326 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ythdf1P59326 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ythdf1P59326 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.28□□□□□ -0.12
Ythdf1P59326 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ythdf1P59326 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ythdf1P59326 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ythdf1P59326 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ythdf1P59326 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ythdf1P59326 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.27□□□□□ -0.12
Ythdf1P59326 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ythdf1P59326 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ythdf1P59326 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.27□□□□□ -0.12
Ythdf1P59326 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ythdf1P59326 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.27□□□□□ -0.13
Ythdf1P59326 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.27□□□□□ -0.13
Ythdf1P59326 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ythdf1P59326 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ythdf1P59326 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms