Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Gm18041-201ENSMUST00000218210 618 ntBASIC11.63□□□□□ -0.55
Ctdsp1P58466 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctdsp1P58466 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.62□□□□□ -0.55
Ctdsp1P58466 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.62□□□□□ -0.55
Ctdsp1P58466 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ctdsp1P58466 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Gm11539-201ENSMUST00000119837 557 ntBASIC11.61□□□□□ -0.55
Ctdsp1P58466 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.61□□□□□ -0.55
Ctdsp1P58466 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.61□□□□□ -0.55
Ctdsp1P58466 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ctdsp1P58466 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctdsp1P58466 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ctdsp1P58466 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms