Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Irf5P56477 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Irf5P56477 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.61■□□□□ 0.41
Irf5P56477 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.61■□□□□ 0.41
Irf5P56477 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.61■□□□□ 0.41
Irf5P56477 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.61■□□□□ 0.41
Irf5P56477 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Irf5P56477 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Irf5P56477 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Irf5P56477 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Irf5P56477 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Irf5P56477 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.6■□□□□ 0.41
Irf5P56477 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Irf5P56477 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.6■□□□□ 0.41
Irf5P56477 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.6■□□□□ 0.41
Irf5P56477 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Irf5P56477 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.6■□□□□ 0.41
Irf5P56477 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.6■□□□□ 0.41
Irf5P56477 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Irf5P56477 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.6■□□□□ 0.41
Irf5P56477 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Irf5P56477 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Irf5P56477 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Gm22065-201ENSMUST00000103753 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm22066-201ENSMUST00000103761 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24932-201ENSMUST00000103763 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24115-201ENSMUST00000103799 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm22190-201ENSMUST00000103827 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm22191-201ENSMUST00000103831 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24721-201ENSMUST00000103849 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm28018-201ENSMUST00000103869 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm26399-201ENSMUST00000103937 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Irf5P56477 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Irf5P56477 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Irf5P56477 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.59■□□□□ 0.41
Irf5P56477 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm25349-201ENSMUST00000177728 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm23616-201ENSMUST00000177797 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm25871-201ENSMUST00000177816 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24752-201ENSMUST00000178240 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24496-201ENSMUST00000178287 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm25649-201ENSMUST00000178476 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm25548-201ENSMUST00000178681 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm23147-201ENSMUST00000178841 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm26095-201ENSMUST00000179270 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm22171-201ENSMUST00000179283 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm23936-201ENSMUST00000179354 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm22619-201ENSMUST00000179516 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm25255-201ENSMUST00000179579 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24755-201ENSMUST00000179691 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm26506-201ENSMUST00000179692 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm25086-201ENSMUST00000179931 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm23243-201ENSMUST00000180047 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24659-201ENSMUST00000180212 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm24169-201ENSMUST00000180244 110 ntBASIC17.59■□□□□ 0.41
Irf5P56477 Gm23689-201ENSMUST00000180354 110 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms