Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
NrlP54846 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NrlP54846 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.82■□□□□ 0.12
NrlP54846 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NrlP54846 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NrlP54846 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Gm8410-201ENSMUST00000117225 605 ntBASIC15.81■□□□□ 0.12
NrlP54846 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.81■□□□□ 0.12
NrlP54846 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NrlP54846 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.81■□□□□ 0.12
NrlP54846 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NrlP54846 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NrlP54846 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.8■□□□□ 0.12
NrlP54846 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.8■□□□□ 0.12
NrlP54846 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
NrlP54846 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.8■□□□□ 0.12
NrlP54846 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.8■□□□□ 0.12
NrlP54846 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.8■□□□□ 0.12
NrlP54846 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NrlP54846 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.8■□□□□ 0.12
NrlP54846 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.8■□□□□ 0.12
NrlP54846 Gm38294-201ENSMUST00000192831 381 ntBASIC15.8■□□□□ 0.12
NrlP54846 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.8■□□□□ 0.12
NrlP54846 Gm18049-201ENSMUST00000208909 581 ntBASIC15.8■□□□□ 0.12
NrlP54846 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NrlP54846 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.8■□□□□ 0.12
NrlP54846 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NrlP54846 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NrlP54846 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NrlP54846 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
NrlP54846 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.79■□□□□ 0.12
NrlP54846 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NrlP54846 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NrlP54846 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NrlP54846 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.78■□□□□ 0.12
NrlP54846 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.78■□□□□ 0.12
NrlP54846 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
NrlP54846 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NrlP54846 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.78■□□□□ 0.12
NrlP54846 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms