Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.71■□□□□ 0.59
Msh6P54276 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Msh6P54276 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Msh6P54276 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Msh6P54276 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Gm4875-201ENSMUST00000118257 786 ntBASIC18.7■□□□□ 0.58
Msh6P54276 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.7■□□□□ 0.58
Msh6P54276 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Gm37230-201ENSMUST00000194491 818 ntBASIC18.7■□□□□ 0.58
Msh6P54276 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.7■□□□□ 0.58
Msh6P54276 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.7■□□□□ 0.58
Msh6P54276 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Msh6P54276 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Msh6P54276 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Msh6P54276 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Msh6P54276 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Msh6P54276 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh6P54276 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.69■□□□□ 0.58
Msh6P54276 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Msh6P54276 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
Msh6P54276 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Msh6P54276 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.69■□□□□ 0.58
Msh6P54276 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh6P54276 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Msh6P54276 Gm14042-201ENSMUST00000120139 833 ntBASIC18.68■□□□□ 0.58
Msh6P54276 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Msh6P54276 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.68■□□□□ 0.58
Msh6P54276 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.68■□□□□ 0.58
Msh6P54276 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.68■□□□□ 0.58
Msh6P54276 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.68■□□□□ 0.58
Msh6P54276 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Gm8515-201ENSMUST00000194852 576 ntBASIC18.68■□□□□ 0.58
Msh6P54276 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Msh6P54276 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.68■□□□□ 0.58
Msh6P54276 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Gm15653-201ENSMUST00000119247 907 ntBASIC18.68■□□□□ 0.58
Msh6P54276 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC18.68■□□□□ 0.58
Msh6P54276 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.68■□□□□ 0.58
Msh6P54276 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.68■□□□□ 0.58
Msh6P54276 Gm16476-201ENSMUST00000221544 139 ntBASIC18.68■□□□□ 0.58
Msh6P54276 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh6P54276 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh6P54276 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Msh6P54276 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Msh6P54276 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.67■□□□□ 0.58
Msh6P54276 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh6P54276 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh6P54276 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms