Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pdx1P52946 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pdx1P52946 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Pdx1P52946 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.69□□□□□ -0.06
Pdx1P52946 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pdx1P52946 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.68□□□□□ -0.06
Pdx1P52946 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.68□□□□□ -0.06
Pdx1P52946 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.68□□□□□ -0.06
Pdx1P52946 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdx1P52946 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.68□□□□□ -0.06
Pdx1P52946 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pdx1P52946 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pdx1P52946 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdx1P52946 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.67□□□□□ -0.06
Pdx1P52946 Gm15427-201ENSMUST00000117288 531 ntBASIC14.67□□□□□ -0.06
Pdx1P52946 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.67□□□□□ -0.06
Pdx1P52946 Gm11594-201ENSMUST00000122313 162 ntBASIC14.67□□□□□ -0.06
Pdx1P52946 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 Gm25911-201ENSMUST00000157621 56 ntBASIC14.67□□□□□ -0.06
Pdx1P52946 Gm16026-204ENSMUST00000162652 683 ntBASIC14.67□□□□□ -0.06
Pdx1P52946 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pdx1P52946 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Pdx1P52946 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.67□□□□□ -0.06
Pdx1P52946 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Pdx1P52946 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdx1P52946 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.66□□□□□ -0.06
Pdx1P52946 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.66□□□□□ -0.06
Pdx1P52946 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
Pdx1P52946 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdx1P52946 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms