Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.23■□□□□ 0.03
SftpbP50405 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SftpbP50405 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SftpbP50405 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SftpbP50405 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
SftpbP50405 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Ank2-226ENSMUST00000189368 339 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44357-201ENSMUST00000195897 142 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm19658-201ENSMUST00000196231 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44367-201ENSMUST00000196836 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44350-201ENSMUST00000197197 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44390-201ENSMUST00000197533 144 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44313-201ENSMUST00000198018 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44486-201ENSMUST00000198508 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44314-201ENSMUST00000199263 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44394-201ENSMUST00000199558 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44484-201ENSMUST00000199873 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44466-201ENSMUST00000200264 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm44359-201ENSMUST00000200671 138 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SftpbP50405 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.22■□□□□ 0.03
SftpbP50405 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SftpbP50405 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SftpbP50405 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SftpbP50405 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SftpbP50405 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SftpbP50405 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.21■□□□□ 0.03
SftpbP50405 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
SftpbP50405 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
SftpbP50405 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.21■□□□□ 0.03
SftpbP50405 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.21■□□□□ 0.03
SftpbP50405 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
SftpbP50405 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SftpbP50405 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SftpbP50405 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SftpbP50405 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SftpbP50405 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SftpbP50405 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SftpbP50405 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SftpbP50405 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SftpbP50405 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SftpbP50405 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SftpbP50405 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.2■□□□□ 0.02
SftpbP50405 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SftpbP50405 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SftpbP50405 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.2■□□□□ 0.02
SftpbP50405 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SftpbP50405 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.2■□□□□ 0.02
SftpbP50405 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.2■□□□□ 0.02
SftpbP50405 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms