Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LtbrP50284 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LtbrP50284 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.42■□□□□ 0.38
LtbrP50284 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.42■□□□□ 0.38
LtbrP50284 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.42■□□□□ 0.38
LtbrP50284 Gm15483-201ENSMUST00000120338 456 ntBASIC17.42■□□□□ 0.38
LtbrP50284 Gm16026-204ENSMUST00000162652 683 ntBASIC17.42■□□□□ 0.38
LtbrP50284 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.42■□□□□ 0.38
LtbrP50284 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Gm9908-201ENSMUST00000211534 448 ntBASIC17.42■□□□□ 0.38
LtbrP50284 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.42■□□□□ 0.38
LtbrP50284 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LtbrP50284 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LtbrP50284 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.42■□□□□ 0.38
LtbrP50284 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LtbrP50284 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LtbrP50284 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LtbrP50284 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.41■□□□□ 0.38
LtbrP50284 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.41■□□□□ 0.38
LtbrP50284 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LtbrP50284 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.41■□□□□ 0.38
LtbrP50284 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LtbrP50284 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.4■□□□□ 0.38
LtbrP50284 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LtbrP50284 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
LtbrP50284 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LtbrP50284 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.4■□□□□ 0.38
LtbrP50284 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.4■□□□□ 0.38
LtbrP50284 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.4■□□□□ 0.38
LtbrP50284 Gm18018-201ENSMUST00000198273 408 ntBASIC17.4■□□□□ 0.38
LtbrP50284 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.4■□□□□ 0.38
LtbrP50284 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LtbrP50284 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LtbrP50284 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LtbrP50284 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LtbrP50284 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LtbrP50284 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.38
LtbrP50284 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LtbrP50284 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LtbrP50284 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LtbrP50284 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LtbrP50284 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LtbrP50284 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LtbrP50284 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LtbrP50284 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.39■□□□□ 0.37
LtbrP50284 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LtbrP50284 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.39■□□□□ 0.37
LtbrP50284 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC17.39■□□□□ 0.37
LtbrP50284 Gm12091-201ENSMUST00000146791 830 ntBASIC17.39■□□□□ 0.37
LtbrP50284 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms