Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.34□□□□□ -0.43
Nkx2-1P50220 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Gm6345-202ENSMUST00000180900 204 ntBASIC12.34□□□□□ -0.43
Nkx2-1P50220 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Gm17808-201ENSMUST00000200859 894 ntBASIC12.34□□□□□ -0.43
Nkx2-1P50220 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nkx2-1P50220 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Nkx2-1P50220 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nkx2-1P50220 Carlr-201ENSMUST00000181515 2574 ntBASIC12.33□□□□□ -0.43
Nkx2-1P50220 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.33□□□□□ -0.44
Nkx2-1P50220 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx2-1P50220 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Celf4-206ENSMUST00000224553 1729 ntBASIC12.32□□□□□ -0.44
Nkx2-1P50220 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx2-1P50220 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Nkx2-1P50220 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms