Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.42■□□□□ 0.22
Brca1P48754 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.42■□□□□ 0.22
Brca1P48754 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Brca1P48754 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Brca1P48754 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Brca1P48754 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Gm15393-201ENSMUST00000120499 219 ntBASIC16.41■□□□□ 0.22
Brca1P48754 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Gm43179-201ENSMUST00000198797 275 ntBASIC16.41■□□□□ 0.22
Brca1P48754 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.41■□□□□ 0.22
Brca1P48754 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.41■□□□□ 0.22
Brca1P48754 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.41■□□□□ 0.22
Brca1P48754 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.41■□□□□ 0.22
Brca1P48754 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Brca1P48754 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Brca1P48754 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Brca1P48754 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.4■□□□□ 0.22
Brca1P48754 Gm45784-201ENSMUST00000188360 142 ntBASIC16.4■□□□□ 0.22
Brca1P48754 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.4■□□□□ 0.22
Brca1P48754 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.4■□□□□ 0.22
Brca1P48754 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Brca1P48754 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Brca1P48754 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Brca1P48754 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Brca1P48754 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Brca1P48754 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Brca1P48754 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Brca1P48754 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.4■□□□□ 0.22
Brca1P48754 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.4■□□□□ 0.22
Brca1P48754 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.4■□□□□ 0.22
Brca1P48754 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Brca1P48754 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.4■□□□□ 0.22
Brca1P48754 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Brca1P48754 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Brca1P48754 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Brca1P48754 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Brca1P48754 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Brca1P48754 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
Brca1P48754 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Brca1P48754 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.39■□□□□ 0.21
Brca1P48754 Gm23931-201ENSMUST00000103842 109 ntBASIC16.39■□□□□ 0.21
Brca1P48754 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.39■□□□□ 0.21
Brca1P48754 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Brca1P48754 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Brca1P48754 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Brca1P48754 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.39■□□□□ 0.21
Brca1P48754 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Brca1P48754 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Brca1P48754 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms