Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.95□□□□□ -0.18
Sox2P48432 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox2P48432 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Sox2P48432 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox2P48432 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox2P48432 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Gm27742-201ENSMUST00000184667 60 ntBASIC13.95□□□□□ -0.18
Sox2P48432 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox2P48432 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Sox2P48432 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox2P48432 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox2P48432 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox2P48432 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox2P48432 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox2P48432 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox2P48432 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sox2P48432 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sox2P48432 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox2P48432 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox2P48432 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.94□□□□□ -0.18
Sox2P48432 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.94□□□□□ -0.18
Sox2P48432 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox2P48432 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Sox2P48432 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.94□□□□□ -0.18
Sox2P48432 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox2P48432 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox2P48432 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox2P48432 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox2P48432 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox2P48432 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox2P48432 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox2P48432 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox2P48432 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Sox2P48432 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Gm15358-201ENSMUST00000119249 520 ntBASIC13.93□□□□□ -0.18
Sox2P48432 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Sox2P48432 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox2P48432 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox2P48432 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox2P48432 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.93□□□□□ -0.18
Sox2P48432 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox2P48432 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Sox2P48432 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.92□□□□□ -0.18
Sox2P48432 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox2P48432 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox2P48432 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox2P48432 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms