Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Gm3436-201ENSMUST00000179930 840 ntBASIC12.85□□□□□ -0.35
TgfaP48030 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.85□□□□□ -0.35
TgfaP48030 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.85□□□□□ -0.35
TgfaP48030 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.85□□□□□ -0.35
TgfaP48030 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TgfaP48030 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.85□□□□□ -0.35
TgfaP48030 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
TgfaP48030 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.85□□□□□ -0.35
TgfaP48030 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TgfaP48030 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
TgfaP48030 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TgfaP48030 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.84□□□□□ -0.35
TgfaP48030 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.84□□□□□ -0.35
TgfaP48030 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.84□□□□□ -0.35
TgfaP48030 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TgfaP48030 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.84□□□□□ -0.35
TgfaP48030 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.84□□□□□ -0.35
TgfaP48030 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.84□□□□□ -0.35
TgfaP48030 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
TgfaP48030 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
TgfaP48030 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.84□□□□□ -0.35
TgfaP48030 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.84□□□□□ -0.35
TgfaP48030 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TgfaP48030 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TgfaP48030 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TgfaP48030 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.83□□□□□ -0.36
TgfaP48030 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.83□□□□□ -0.36
TgfaP48030 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.83□□□□□ -0.36
TgfaP48030 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.83□□□□□ -0.36
TgfaP48030 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.83□□□□□ -0.36
TgfaP48030 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TgfaP48030 Gm9908-201ENSMUST00000211534 448 ntBASIC12.83□□□□□ -0.36
TgfaP48030 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
TgfaP48030 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.83□□□□□ -0.36
TgfaP48030 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TgfaP48030 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TgfaP48030 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TgfaP48030 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TgfaP48030 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
TgfaP48030 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.82□□□□□ -0.36
TgfaP48030 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TgfaP48030 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TgfaP48030 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TgfaP48030 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TgfaP48030 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms