Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.05□□□□□ -0.16
Nkx2-6P43688 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Gm27622-201ENSMUST00000183779 60 ntBASIC14.05□□□□□ -0.16
Nkx2-6P43688 Gm38225-201ENSMUST00000194001 393 ntBASIC14.05□□□□□ -0.16
Nkx2-6P43688 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Sybu-209ENSMUST00000228639 4113 ntBASIC14.05□□□□□ -0.16
Nkx2-6P43688 BC037039-201ENSMUST00000192003 2205 ntBASIC14.05□□□□□ -0.16
Nkx2-6P43688 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx2-6P43688 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.04□□□□□ -0.16
Nkx2-6P43688 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.04□□□□□ -0.16
Nkx2-6P43688 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Nkx2-6P43688 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Nkx2-6P43688 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.04□□□□□ -0.16
Nkx2-6P43688 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.04□□□□□ -0.16
Nkx2-6P43688 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.04□□□□□ -0.16
Nkx2-6P43688 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-6P43688 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Gm27306-201ENSMUST00000183970 107 ntBASIC14.03□□□□□ -0.16
Nkx2-6P43688 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.03□□□□□ -0.16
Nkx2-6P43688 Gm5779-201ENSMUST00000218467 910 ntBASIC14.03□□□□□ -0.16
Nkx2-6P43688 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.03□□□□□ -0.16
Nkx2-6P43688 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-6P43688 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-6P43688 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms