Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.68■□□□□ 0.26
Sdc2P43407 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sdc2P43407 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Sdc2P43407 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sdc2P43407 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sdc2P43407 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sdc2P43407 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.67■□□□□ 0.26
Sdc2P43407 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Sdc2P43407 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Gm15173-201ENSMUST00000122049 433 ntBASIC16.67■□□□□ 0.26
Sdc2P43407 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.67■□□□□ 0.26
Sdc2P43407 Gm7787-201ENSMUST00000216858 688 ntBASIC16.67■□□□□ 0.26
Sdc2P43407 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.67■□□□□ 0.26
Sdc2P43407 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.67■□□□□ 0.26
Sdc2P43407 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.67■□□□□ 0.26
Sdc2P43407 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sdc2P43407 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sdc2P43407 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.67■□□□□ 0.26
Sdc2P43407 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sdc2P43407 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Sdc2P43407 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Sdc2P43407 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.66■□□□□ 0.26
Sdc2P43407 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Gm7230-201ENSMUST00000173026 815 ntBASIC16.66■□□□□ 0.26
Sdc2P43407 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.66■□□□□ 0.26
Sdc2P43407 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sdc2P43407 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Sdc2P43407 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Sdc2P43407 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sdc2P43407 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sdc2P43407 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sdc2P43407 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdc2P43407 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdc2P43407 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.65■□□□□ 0.26
Sdc2P43407 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.65■□□□□ 0.26
Sdc2P43407 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Sdc2P43407 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdc2P43407 Gm11764-201ENSMUST00000120221 623 ntBASIC16.65■□□□□ 0.26
Sdc2P43407 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sdc2P43407 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sdc2P43407 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.65■□□□□ 0.26
Sdc2P43407 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.65■□□□□ 0.26
Sdc2P43407 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sdc2P43407 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sdc2P43407 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.64■□□□□ 0.25
Sdc2P43407 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sdc2P43407 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sdc2P43407 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.64■□□□□ 0.25
Sdc2P43407 Gm6550-201ENSMUST00000187574 993 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms