Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.33■□□□□ 0.04
Msh2P43247 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Msh2P43247 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.33■□□□□ 0.04
Msh2P43247 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Msh2P43247 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.33■□□□□ 0.04
Msh2P43247 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh2P43247 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Msh2P43247 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.32■□□□□ 0.04
Msh2P43247 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Msh2P43247 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Msh2P43247 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.32■□□□□ 0.04
Msh2P43247 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Msh2P43247 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Msh2P43247 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Msh2P43247 Gm7230-201ENSMUST00000173026 815 ntBASIC15.32■□□□□ 0.04
Msh2P43247 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.32■□□□□ 0.04
Msh2P43247 Gm10060-201ENSMUST00000212002 111 ntBASIC15.32■□□□□ 0.04
Msh2P43247 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.32■□□□□ 0.04
Msh2P43247 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.32■□□□□ 0.04
Msh2P43247 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Msh2P43247 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Msh2P43247 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh2P43247 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Msh2P43247 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
Msh2P43247 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Msh2P43247 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Msh2P43247 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.31■□□□□ 0.04
Msh2P43247 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Gm15173-201ENSMUST00000122049 433 ntBASIC15.31■□□□□ 0.04
Msh2P43247 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.31■□□□□ 0.04
Msh2P43247 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.31■□□□□ 0.04
Msh2P43247 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.31■□□□□ 0.04
Msh2P43247 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.31■□□□□ 0.04
Msh2P43247 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.31■□□□□ 0.04
Msh2P43247 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Msh2P43247 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh2P43247 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
Msh2P43247 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh2P43247 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Msh2P43247 Gm15358-201ENSMUST00000119249 520 ntBASIC15.3■□□□□ 0.04
Msh2P43247 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Msh2P43247 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.3■□□□□ 0.04
Msh2P43247 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.3■□□□□ 0.04
Msh2P43247 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh2P43247 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms