Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Mir449b-201ENSMUST00000104833 80 ntBASIC14.2□□□□□ -0.14
Tnfsf9P41274 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.2□□□□□ -0.14
Tnfsf9P41274 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.2□□□□□ -0.14
Tnfsf9P41274 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf9P41274 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gm25287-201ENSMUST00000103846 110 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gm22918-201ENSMUST00000103855 110 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gm15483-201ENSMUST00000120338 456 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gm25948-201ENSMUST00000175334 112 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gm38225-201ENSMUST00000194001 393 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.19□□□□□ -0.14
Tnfsf9P41274 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf9P41274 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf9P41274 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf9P41274 Gm22065-201ENSMUST00000103753 110 ntBASIC14.18□□□□□ -0.14
Tnfsf9P41274 Gm22066-201ENSMUST00000103761 110 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms