Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfc1P35601 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Gm7367-201ENSMUST00000057611 492 ntBASIC15.68■□□□□ 0.1
Rfc1P35601 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Rfc1P35601 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.68■□□□□ 0.1
Rfc1P35601 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Rfc1P35601 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfc1P35601 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfc1P35601 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rfc1P35601 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rfc1P35601 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfc1P35601 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Rfc1P35601 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.67■□□□□ 0.1
Rfc1P35601 Gm45328-201ENSMUST00000210942 917 ntBASIC15.67■□□□□ 0.1
Rfc1P35601 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Rfc1P35601 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rfc1P35601 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rfc1P35601 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfc1P35601 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rfc1P35601 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rfc1P35601 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.66■□□□□ 0.1
Rfc1P35601 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.66■□□□□ 0.1
Rfc1P35601 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.66■□□□□ 0.1
Rfc1P35601 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.66■□□□□ 0.1
Rfc1P35601 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rfc1P35601 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Rfc1P35601 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.66■□□□□ 0.1
Rfc1P35601 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfc1P35601 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rfc1P35601 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rfc1P35601 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Rfc1P35601 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rfc1P35601 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rfc1P35601 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rfc1P35601 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.65■□□□□ 0.1
Rfc1P35601 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfc1P35601 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms