Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.22■□□□□ 0.03
Mmp13P33435 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Gm12350-201ENSMUST00000121208 462 ntBASIC15.22■□□□□ 0.03
Mmp13P33435 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.22■□□□□ 0.03
Mmp13P33435 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.22■□□□□ 0.03
Mmp13P33435 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Gm18206-201ENSMUST00000207027 926 ntBASIC15.22■□□□□ 0.03
Mmp13P33435 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Mmp13P33435 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mmp13P33435 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp13P33435 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp13P33435 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp13P33435 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mmp13P33435 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mmp13P33435 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.21■□□□□ 0.03
Mmp13P33435 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.21■□□□□ 0.03
Mmp13P33435 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mmp13P33435 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp13P33435 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp13P33435 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp13P33435 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.21■□□□□ 0.02
Mmp13P33435 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Mmp13P33435 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp13P33435 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.21■□□□□ 0.02
Mmp13P33435 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp13P33435 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp13P33435 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.2■□□□□ 0.02
Mmp13P33435 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.2■□□□□ 0.02
Mmp13P33435 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Gm23547-201ENSMUST00000158210 271 ntBASIC15.2■□□□□ 0.02
Mmp13P33435 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Mmp13P33435 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.2■□□□□ 0.02
Mmp13P33435 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp13P33435 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp13P33435 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Mmp13P33435 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp13P33435 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp13P33435 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mmp13P33435 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Mmp13P33435 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.2■□□□□ 0.02
Mmp13P33435 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.19■□□□□ 0.02
Mmp13P33435 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp13P33435 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp13P33435 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp13P33435 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms