Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.73□□□□□ -0.21
Cd40lgP27548 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Gm4899-201ENSMUST00000178708 719 ntBASIC13.72□□□□□ -0.21
Cd40lgP27548 Gm5264-201ENSMUST00000190584 848 ntBASIC13.72□□□□□ -0.21
Cd40lgP27548 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.72□□□□□ -0.21
Cd40lgP27548 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.72□□□□□ -0.21
Cd40lgP27548 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cd40lgP27548 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cd40lgP27548 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cd40lgP27548 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.71□□□□□ -0.21
Cd40lgP27548 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Cd40lgP27548 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Cd40lgP27548 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.71□□□□□ -0.21
Cd40lgP27548 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cd40lgP27548 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cd40lgP27548 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cd40lgP27548 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Cd40lgP27548 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cd40lgP27548 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cd40lgP27548 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.7□□□□□ -0.22
Cd40lgP27548 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Gm17271-201ENSMUST00000165535 355 ntBASIC13.7□□□□□ -0.22
Cd40lgP27548 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.7□□□□□ -0.22
Cd40lgP27548 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.7□□□□□ -0.22
Cd40lgP27548 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.7□□□□□ -0.22
Cd40lgP27548 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.7□□□□□ -0.22
Cd40lgP27548 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cd40lgP27548 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cd40lgP27548 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cd40lgP27548 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms