Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msx1P13297 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msx1P13297 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msx1P13297 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msx1P13297 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Msx1P13297 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.1□□□□□ -0.15
Msx1P13297 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Msx1P13297 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.09□□□□□ -0.15
Msx1P13297 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Msx1P13297 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.09□□□□□ -0.15
Msx1P13297 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Msx1P13297 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.09□□□□□ -0.15
Msx1P13297 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.09□□□□□ -0.15
Msx1P13297 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.09□□□□□ -0.15
Msx1P13297 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Msx1P13297 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Msx1P13297 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.09□□□□□ -0.15
Msx1P13297 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Msx1P13297 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx1P13297 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx1P13297 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx1P13297 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Msx1P13297 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Msx1P13297 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Msx1P13297 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Msx1P13297 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.08□□□□□ -0.16
Msx1P13297 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.08□□□□□ -0.16
Msx1P13297 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.08□□□□□ -0.16
Msx1P13297 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.08□□□□□ -0.16
Msx1P13297 Gm23547-201ENSMUST00000158210 271 ntBASIC14.08□□□□□ -0.16
Msx1P13297 Mir6977-201ENSMUST00000184960 64 ntBASIC14.08□□□□□ -0.16
Msx1P13297 Gm36991-201ENSMUST00000191800 648 ntBASIC14.08□□□□□ -0.16
Msx1P13297 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC14.08□□□□□ -0.16
Msx1P13297 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.08□□□□□ -0.16
Msx1P13297 AC102523.2-201ENSMUST00000227813 983 ntBASIC14.08□□□□□ -0.16
Msx1P13297 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.08□□□□□ -0.16
Msx1P13297 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.08□□□□□ -0.16
Msx1P13297 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC14.08□□□□□ -0.16
Msx1P13297 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.08□□□□□ -0.16
Msx1P13297 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.08□□□□□ -0.16
Msx1P13297 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Msx1P13297 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Msx1P13297 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.07□□□□□ -0.16
Msx1P13297 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Msx1P13297 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Msx1P13297 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.07□□□□□ -0.16
Msx1P13297 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Gm12428-201ENSMUST00000119844 727 ntBASIC14.07□□□□□ -0.16
Msx1P13297 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.07□□□□□ -0.16
Msx1P13297 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Msx1P13297 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Gm27430-201ENSMUST00000184585 107 ntBASIC14.07□□□□□ -0.16
Msx1P13297 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.07□□□□□ -0.16
Msx1P13297 Gm44333-201ENSMUST00000197168 107 ntBASIC14.07□□□□□ -0.16
Msx1P13297 Gm7774-201ENSMUST00000200064 533 ntBASIC14.07□□□□□ -0.16
Msx1P13297 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Msx1P13297 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Msx1P13297 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Msx1P13297 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.07□□□□□ -0.16
Msx1P13297 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms