Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cntn1P12960 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.25□□□□□ -0.13
Cntn1P12960 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.25□□□□□ -0.13
Cntn1P12960 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.25□□□□□ -0.13
Cntn1P12960 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.25□□□□□ -0.13
Cntn1P12960 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.25□□□□□ -0.13
Cntn1P12960 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.25□□□□□ -0.13
Cntn1P12960 Gm43474-201ENSMUST00000196415 774 ntBASIC14.25□□□□□ -0.13
Cntn1P12960 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Gm43125-201ENSMUST00000201724 730 ntBASIC14.25□□□□□ -0.13
Cntn1P12960 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cntn1P12960 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.25□□□□□ -0.13
Cntn1P12960 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.25□□□□□ -0.13
Cntn1P12960 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Cntn1P12960 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cntn1P12960 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cntn1P12960 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Gm6973-201ENSMUST00000117080 721 ntBASIC14.24□□□□□ -0.13
Cntn1P12960 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.24□□□□□ -0.13
Cntn1P12960 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.24□□□□□ -0.13
Cntn1P12960 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.24□□□□□ -0.13
Cntn1P12960 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cntn1P12960 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cntn1P12960 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cntn1P12960 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.23□□□□□ -0.13
Cntn1P12960 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.23□□□□□ -0.13
Cntn1P12960 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cntn1P12960 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.23□□□□□ -0.13
Cntn1P12960 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.23□□□□□ -0.13
Cntn1P12960 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.23□□□□□ -0.13
Cntn1P12960 Gm15483-201ENSMUST00000120338 456 ntBASIC14.23□□□□□ -0.13
Cntn1P12960 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
Cntn1P12960 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cntn1P12960 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.23□□□□□ -0.13
Cntn1P12960 Gm5312-201ENSMUST00000203728 547 ntBASIC14.23□□□□□ -0.13
Cntn1P12960 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cntn1P12960 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.23□□□□□ -0.13
Cntn1P12960 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cntn1P12960 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.23□□□□□ -0.13
Cntn1P12960 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cntn1P12960 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.22□□□□□ -0.13
Cntn1P12960 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.22□□□□□ -0.13
Cntn1P12960 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cntn1P12960 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cntn1P12960 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cntn1P12960 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.22□□□□□ -0.13
Cntn1P12960 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Cntn1P12960 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms