Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccl3P10855 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccl3P10855 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl3P10855 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Ccl3P10855 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccl3P10855 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Ccl3P10855 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccl3P10855 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccl3P10855 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccl3P10855 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccl3P10855 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Gm6745-201ENSMUST00000199216 526 ntBASIC13.06□□□□□ -0.32
Ccl3P10855 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccl3P10855 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.06□□□□□ -0.32
Ccl3P10855 Gm45453-201ENSMUST00000211758 853 ntBASIC13.06□□□□□ -0.32
Ccl3P10855 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.06□□□□□ -0.32
Ccl3P10855 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.06□□□□□ -0.32
Ccl3P10855 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccl3P10855 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccl3P10855 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl3P10855 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ccl3P10855 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Gm23984-201ENSMUST00000157139 203 ntBASIC13.05□□□□□ -0.32
Ccl3P10855 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.05□□□□□ -0.32
Ccl3P10855 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.05□□□□□ -0.32
Ccl3P10855 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl3P10855 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ccl3P10855 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.05□□□□□ -0.32
Ccl3P10855 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ccl3P10855 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
Ccl3P10855 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ccl3P10855 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccl3P10855 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ccl3P10855 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ccl3P10855 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.04□□□□□ -0.32
Ccl3P10855 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ccl3P10855 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.04□□□□□ -0.32
Ccl3P10855 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms