Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a1P02463 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.02■□□□□ 0.47
Col4a1P02463 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.02■□□□□ 0.47
Col4a1P02463 Gm15823-201ENSMUST00000064305 670 ntBASIC18.02■□□□□ 0.47
Col4a1P02463 Gm25857-201ENSMUST00000082788 129 ntBASIC18.02■□□□□ 0.47
Col4a1P02463 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a1P02463 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a1P02463 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a1P02463 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col4a1P02463 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Col4a1P02463 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.01■□□□□ 0.47
Col4a1P02463 Gm33320-201ENSMUST00000192232 530 ntBASIC18.01■□□□□ 0.47
Col4a1P02463 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC18.01■□□□□ 0.47
Col4a1P02463 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.01■□□□□ 0.47
Col4a1P02463 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Col4a1P02463 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.01■□□□□ 0.47
Col4a1P02463 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col4a1P02463 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Col4a1P02463 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18■□□□□ 0.47
Col4a1P02463 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18■□□□□ 0.47
Col4a1P02463 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18■□□□□ 0.47
Col4a1P02463 Gm15460-201ENSMUST00000118147 391 ntBASIC18■□□□□ 0.47
Col4a1P02463 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC18■□□□□ 0.47
Col4a1P02463 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Col4a1P02463 AC121804.3-201ENSMUST00000223420 295 ntBASIC18■□□□□ 0.47
Col4a1P02463 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Col4a1P02463 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a1P02463 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a1P02463 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a1P02463 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col4a1P02463 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a1P02463 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a1P02463 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col4a1P02463 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.99■□□□□ 0.47
Col4a1P02463 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.99■□□□□ 0.47
Col4a1P02463 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col4a1P02463 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Col4a1P02463 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.99■□□□□ 0.47
Col4a1P02463 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.99■□□□□ 0.47
Col4a1P02463 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Col4a1P02463 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.99■□□□□ 0.47
Col4a1P02463 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col4a1P02463 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.99■□□□□ 0.47
Col4a1P02463 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.99■□□□□ 0.47
Col4a1P02463 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.99■□□□□ 0.47
Col4a1P02463 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col4a1P02463 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col4a1P02463 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.98■□□□□ 0.47
Col4a1P02463 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Col4a1P02463 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.98■□□□□ 0.47
Col4a1P02463 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Col4a1P02463 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col4a1P02463 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.97■□□□□ 0.47
Col4a1P02463 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col4a1P02463 Gm8602-201ENSMUST00000184045 607 ntBASIC17.97■□□□□ 0.47
Col4a1P02463 Gm18187-201ENSMUST00000196476 984 ntBASIC17.97■□□□□ 0.47
Col4a1P02463 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.97■□□□□ 0.47
Col4a1P02463 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms